Download Segger
As of June 16, 2010, Segger is automatically included in daily builds of
Chimera.
Thus downloading it from the links below is not necessary if you instead just get the
latest daily build.
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Version 1.6
- This version only works with Chimera 1.5 daily build (June 4 and later). The reason for this is that these builds include new features that Segger depends on, which were not present in earlier versions of Chimera.
- In this version, the Segger dialog is replaced by two separate dialogs: Segment Map, and Fit To Segments. The first deals with segmentation, and the second with fitting structures based on segmented regions.
- A new graph menu now also allows you to visualize the segmented regions as a graph, where nodes are regions, and links between nodes represent region contacts. You can visualize several properties of the contacts such as maximum density at the contact interface, average density, and number of contacting voxels. When a graph is shown, regions are scaled down, so you still see the regions. You can also do grouping and ungrouping as before; the graph is automatically updated after such operations.
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Version 1.5
- This version only works with Chimera 1.5 daily build 30471 and up.
- This version consists only of Python code that uses functions in Chimera for visualizing and working with density maps. Because an external binary is no longer called, the segmentation process is faster. The interface is also improved.
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Version 1.4
- This version works with Chimera versions 1.3 and up.
- This version consists of Python and C++ code. The C++ code has been compiled on the most common platforms, and this program is called from within Chimera to perform part of the segmentation procedure.
