Segger
Segger is a tool for segmenting 3D density maps obtained using cryo-electron microscopy. It uses the watershed method, which is fast and requires very little user input. Over-segmentation is dealt with by scale-space filtering. Segger also allows the use of segmentation results to help place or fit atomic structures into density maps.
Updates:
- June 16, 2010 - Segger 1.6 is now packaged automatically in daily builds of Chimera! Thus instead of downloading it from the Download page, you can more simply just get the latest daily build of Chimera.
- June 8, 2010 - Version 1.6 released. See Download page for changes and new features.
- May 31, 2010 - Segger home-page moved to Baylor College of Medicine server.
- May 13, 2010 - Released version 1.5. Watershed segmentation is now a native Chimera function, and hence segmentation is even faster.
- March 14, 2010 - Segger is now a Sourceforge project. Follow this link to join the team, submit feature requests, post discussion messages, report bugs, etc.
- March 13, 2010 - Released version 1.4. Redesigned UI, again by Tom Goddard.
- Feb. 11, 2010 - Released version 1.3, with UI improvements by Tom Goddard.
- Jan. 17, 2010 - Presenting Segger at BCM Cryo-EM workshop.
- Jan. 17, 2010 - Segger is listed in the the EMDatabank.org software list , and the Chimera plugins page.
- Jan. 17, 2010 - Released version 1.2 with improved segmentation interface.
- Nov. 27, 2009 - Added Windows version.
- Nov. 24, 2009 - Released version 1.12. Updated the documentation pages.
