National Center for Macromolecular Imaging

Partial List of NCMI Publications

2011

The structure of barmah forest virus as revealed by cryo-electron microscopy at a 6-angstrom resolution has detailed transmembrane protein architecture and interactions. (2011) Kostyuchenko VA, Jakana J, Liu X, Haddow AD, Aung M, Weaver SC, Chiu W, Lok SM, J Virol
Practical performance evaluation of a 10k × 10k CCD for electron cryo-microscopy. (2011) Bammes BE, Rochat RH, Jakana J, Chiu W, J Struct Biol
Effect of the peptide secondary structure on the peptide amphiphile supramolecular structure and interactions. (2011) Missirlis D, Chworos A, Fu CJ, Khant HA, Krogstad DV, Tirrell M, Langmuir
Cryo-EM structure of a group II chaperonin in the prehydrolysis ATP-bound state leading to lid closure. (2011) Zhang J, Ma B, DiMaio F, Douglas NR, Joachimiak LA, Baker D, Frydman J, Levitt M, Chiu W, Structure
Modeling protein structure at near atomic resolutions with Gorgon. (2011) Baker ML, Abeysinghe SS, Schuh S, Coleman RA, Abrams A, Marsh MP, Hryc CF, Ruths T, Chiu W, Ju T, J Struct Biol
Interbilayer-crosslinked multilamellar vesicles as synthetic vaccines for potent humoral and cellular immune responses. (2011) Moon JJ, Suh H, Bershteyn A, Stephan MT, Liu H, Huang B, Sohail M, Luo S, Um SH, Khant H, Goodwin JT, Ramos J, Chiu W, Irvine DJ, Nat Mater
Structure of Trypanosoma brucei flagellum accounts for its bihelical motion. (2011) Koyfman AY, Schmid MF, Gheiratmand L, Fu CJ, Khant HA, Huang D, He CY, Chiu W, Proc Natl Acad Sci U S A
Structural basis for scaffolding-mediated assembly and maturation of a dsDNA virus. (2011) Chen DH, Baker ML, Hryc CF, DiMaio F, Jakana J, Wu W, Dougherty M, Haase-Pettingell C, Schmid MF, Jiang W, Baker D, King JA, Chiu W, Proc Natl Acad Sci U S A
Dual action of ATP hydrolysis couples lid closure to substrate release into the group II chaperonin chamber. (2011) Douglas NR, Reissmann S, Zhang J, Chen B, Jakana J, Kumar R, Chiu W, Frydman J, Cell
EMDataBank.org: unified data resource for CryoEM. (2011) Lawson CL, Baker ML, Best C, Bi C, Dougherty M, Feng P, van Ginkel G, Devkota B, Lagerstedt I, Ludtke SJ, Newman RH, Oldfield TJ, Rees I, Sahni G, Sala R, Velankar S, Warren J, Westbrook JD, Henrick K, Kleywegt GJ, Berman HM, Chiu W, Nucleic Acids Res
The group II chaperonin Mm-Cpn binds and refolds human γD crystallin. (2011) Knee KM, Goulet DR, Zhang J, Chen B, Chiu W, King JA, Protein Sci
Electron cryomicroscopy structure of a membrane-anchored mitochondrial AAA protease. (2011) Lee S, Augustin S, Tatsuta T, Gerdes F, Langer T, Tsai FT, J Biol Chem
Seeing the portal in herpes simplex virus type 1 B capsids. (2011) Rochat RH, Liu X, Murata K, Nagayama K, Rixon FJ, Chiu W, J Virol
4.4 Å cryo-EM structure of an enveloped alphavirus Venezuelan equine encephalitis virus. (2011) Zhang R, Hryc CF, Cong Y, Liu X, Jakana J, Gorchakov R, Baker ML, Weaver SC, Chiu W, EMBO J
Flexible architecture of IP3R1 by Cryo-EM. (2011) Ludtke SJ, Tran TP, Ngo QT, Moiseenkova-Bell VY, Chiu W, Serysheva II, Structure
Near-Atomic-Resolution Cryo-EM for Molecular Virology. (2011) Hryc CF, Chen DH, Chiu W, Curr Opin Virol
Partially polymerized liposomes: stable against leakage yet capable of instantaneous release for remote controlled drug delivery. (2011) Qin G, Li Z, Xia R, Li F, O'Neill BE, Goodwin JT, Khant HA, Chiu W, Li KC, Nanotechnology
Functional and structural studies of TRP channels heterologously expressed in budding yeast. (2011) Moiseenkova-Bell V, Wensel TG, Adv Exp Med Biol
Single-particle electron cryotomography (cryoET). (2011) Schmid MF, Adv Protein Chem Struct Biol

2010

Cryo-EM of macromolecular assemblies at near-atomic resolution. (2010) Baker ML, Zhang J, Ludtke SJ, Chiu W, Nat Protoc
Workshop on molecular animation. (2010) Bromberg S, Chiu W, Ferrin TE, Structure
Visualizing the structural changes of bacteriophage Epsilon15 and its Salmonella host during infection. (2010) Chang JT, Schmid MF, Haase-Pettingell C, Weigele PR, King JA, Chiu W, J Mol Biol
CryoEM structure of Hsp104 and its mechanistic implication for protein disaggregation. (2010) Lee S, Sielaff B, Lee J, Tsai FT, Proc Natl Acad Sci U S A
Tracing conformational changes in proteins. (2010) Haspel N, Moll M, Baker ML, Chiu W, Kavraki LE, BMC Struct Biol
Electron microscopy, immunostaining, cytoskeleton visualization, in situ hybridization, and three-dimensional reconstruction of Xenopus oocytes. (2010) Bilinski SM, Jaglarz MK, Dougherty MT, Kloc M, Methods
4.0-A resolution cryo-EM structure of the mammalian chaperonin TRiC/CCT reveals its unique subunit arrangement. (2010) Cong Y, Baker ML, Jakana J, Woolford D, Miller EJ, Reissmann S, Kumar RN, Redding-Johanson AM, Batth TS, Mukhopadhyay A, Ludtke SJ, Frydman J, Chiu W, Proc Natl Acad Sci U S A
Radiation damage effects at four specimen temperatures from 4 to 100 K. (2010) Bammes BE, Jakana J, Schmid MF, Chiu W, J Struct Biol
MOTIF-EM: an automated computational tool for identifying conserved regions in CryoEM structures. (2010) Saha M, Levitt M, Chiu W, Bioinformatics
Quantitative analysis of cryo-EM density map segmentation by watershed and scale-space filtering, and fitting of structures by alignment to regions. (2010) Pintilie GD, Zhang J, Goddard TD, Chiu W, Gossard DC, J Struct Biol
Structural changes in a marine podovirus associated with release of its genome into Prochlorococcus. (2010) Liu X, Zhang Q, Murata K, Baker ML, Sullivan MB, Fu C, Dougherty MT, Schmid MF, Osburne MS, Chisholm SW, Chiu W, Nat Struct Mol Biol
Mechanism of folding chamber closure in a group II chaperonin. (2010) Zhang J, Baker ML, Schröder GF, Douglas NR, Reissmann S, Jakana J, Dougherty M, Fu CJ, Levitt M, Ludtke SJ, Frydman J, Chiu W, Nature
Model of human low-density lipoprotein and bound receptor based on cryoEM. (2010) Ren G, Rudenko G, Ludtke SJ, Deisenhofer J, Chiu W, Pownall HJ, Proc Natl Acad Sci U S A
Automated pipeline for atlas-based annotation of gene expression patterns: application to postnatal day 7 mouse brain. (2010) Carson J, Ju T, Bello M, Thaller C, Warren J, Kakadiaris IA, Chiu W, Eichele G, Methods
Structure of a conserved retroviral RNA packaging element by NMR spectroscopy and cryo-electron tomography. (2010) Miyazaki Y, Irobalieva RN, Tolbert BS, Smalls-Mantey A, Iyalla K, Loeliger K, D'Souza V, Khant H, Schmid MF, Garcia EL, Telesnitsky A, Chiu W, Summers MF, J Mol Biol
Zernike phase contrast cryo-electron microscopy and tomography for structure determination at nanometer and subnanometer resolutions. (2010) Murata K, Liu X, Danev R, Jakana J, Schmid MF, King J, Nagayama K, Chiu W, Structure
Automated specimen search in cryo-TEM observation with DIFF-defocus imaging. (2010) Nakamura N, Shimizu Y, Shinkawa T, Nakata M, Bammes B, Zhang J, Chiu W, J Electron Microsc (Tokyo)
Rotavirus cell entry. (2010) Baker M, Prasad BV, Curr Top Microbiol Immunol
Semi-isometric registration of line features for flexible fitting of protein structures. (2010) Abeysinghe S, Baker ML, Chiu W, Ju T, Comput Graph Forum
Analyses of subnanometer resolution cryo-EM density maps. (2010) Baker ML, Baker MR, Hryc CF, Dimaio F, Methods Enzymol

2009

Refinement of protein structures into low-resolution density maps using rosetta. (2009) DiMaio F, Tyka MD, Baker ML, Chiu W, Baker D, J Mol Biol
Structural mechanism of SDS-induced enzyme activity of scorpion hemocyanin revealed by electron cryomicroscopy. (2009) Cong Y, Zhang Q, Woolford D, Schweikardt T, Khant H, Dougherty M, Ludtke SJ, Chiu W, Decker H, Structure
Interprotofilament interactions between Alzheimer's Abeta1-42 peptides in amyloid fibrils revealed by cryoEM. (2009) Zhang R, Hu X, Khant H, Ludtke SJ, Chiu W, Schmid MF, Frieden C, Lee JM, Proc Natl Acad Sci U S A
Hot on the trail of TRP channel structure. (2009) Moiseenkova-Bell VY, Wensel TG, J Gen Physiol
Estimating contrast transfer function and associated parameters by constrained non-linear optimization. (2009) Yang C, Jiang W, Chen DH, Adiga U, Ng EG, Chiu W, J Microsc
Characterization of antibiotic peptide pores using cryo-EM and comparison to neutron scattering. (2009) Han M, Mei Y, Khant H, Ludtke SJ, Biophys J
JADAS: a customizable automated data acquisition system and its application to ice-embedded single particles. (2009) Zhang J, Nakamura N, Shimizu Y, Liang N, Liu X, Jakana J, Marsh MP, Booth CR, Shinkawa T, Nakata M, Chiu W, J Struct Biol
Disruption of human plasma high-density lipoproteins by streptococcal serum opacity factor requires labile apolipoprotein A-I. (2009) Han M, Gillard BK, Courtney HS, Ward K, Rosales C, Khant H, Ludtke SJ, Pownall HJ, Biochemistry
Ryanodine receptor structure: progress and challenges. (2009) Hamilton SL, Serysheva II, J Biol Chem
Rotavirus architecture at subnanometer resolution. (2009) Li Z, Baker ML, Jiang W, Estes MK, Prasad BV, J Virol
Identifying Components in 3D Density Maps of Protein Nanomachines by Multi-scale Segmentation. (2009) Pintilie G, Zhang J, Chiu W, Gossard D, IEEE NIH Life Sci Syst Appl Workshop

2008

Location and flexibility of the unique C-terminal tail of Aquifex aeolicus co-chaperonin protein 10 as derived by cryo-electron microscopy and biophysical techniques. (2008) Chen DH, Luke K, Zhang J, Chiu W, Wittung-Stafshede P, J Mol Biol
Signal transducing membrane complexes of photoreceptor outer segments. (2008) Wensel TG, Vision Res
Mouse early oocytes are transiently polar: three-dimensional and ultrastructural analysis. (2008) Kloc M, Jaglarz M, Dougherty M, Stewart MD, Nel-Themaat L, Bilinski S, Exp Cell Res
Redox-triggered contents release from liposomes. (2008) Ong W, Yang Y, Cruciano AC, McCarley RL, J Am Chem Soc
Structure of TRPV1 channel revealed by electron cryomicroscopy. (2008) Moiseenkova-Bell VY, Stanciu LA, Serysheva II, Tobe BJ, Wensel TG, Proc Natl Acad Sci U S A
Functional maturation of the human antibody response to rotavirus. (2008) Kallewaard NL, McKinney BA, Gu Y, Chen A, Prasad BV, Crowe JE Jr, J Immunol
Methods for aligning and for averaging 3D volumes with missing data. (2008) Schmid MF, Booth CR, J Struct Biol
De novo backbone trace of GroEL from single particle electron cryomicroscopy. (2008) Ludtke SJ, Baker ML, Chen DH, Song JL, Chuang DT, Chiu W, Structure
Remotely triggered liposome release by near-infrared light absorption via hollow gold nanoshells. (2008) Wu G, Mikhailovsky A, Khant HA, Fu C, Chiu W, Zasadzinski JA, J Am Chem Soc
Subnanometer-resolution electron cryomicroscopy-based domain models for the cytoplasmic region of skeletal muscle RyR channel. (2008) Serysheva II, Ludtke SJ, Baker ML, Cong Y, Topf M, Eramian D, Sali A, Hamilton SL, Chiu W, Proc Natl Acad Sci U S A
Achievable resolution from images of biological specimens acquired from a 4k x 4k CCD camera in a 300-kV electron cryomicroscope. (2008) Chen DH, Jakana J, Liu X, Schmid MF, Chiu W, J Struct Biol
Mechanism of lid closure in the eukaryotic chaperonin TRiC/CCT. (2008) Booth CR, Meyer AS, Cong Y, Topf M, Sali A, Ludtke SJ, Chiu W, Frydman J, Nat Struct Mol Biol
Crystallographic conformers of actin in a biologically active bundle of filaments. (2008) Cong Y, Topf M, Sali A, Matsudaira P, Dougherty M, Chiu W, Schmid MF, J Mol Biol
Cryo-electron microscopy of coagulation Factor VIII bound to lipid nanotubes. (2008) Parmenter CD, Cane MC, Zhang R, Stoilova-McPhie S, Biochem Biophys Res Commun
Backbone structure of the infectious epsilon15 virus capsid revealed by electron cryomicroscopy. (2008) Jiang W, Baker ML, Jakana J, Weigele PR, King J, Chiu W, Nature
Protein structure fitting and refinement guided by cryo-EM density. (2008) Topf M, Lasker K, Webb B, Wolfson H, Chiu W, Sali A, Structure
X-ray structure of NS1 from a highly pathogenic H5N1 influenza virus. (2008) Bornholdt ZA, Prasad BV, Nature

2007

Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm. (2007) Liu X, Jiang W, Jakana J, Chiu W, J Struct Biol
Biophysical methods: structure, dynamics and gorgeous images. (2007) Chiu W, Moffat K, Curr Opin Struct Biol
Genome sequence, structural proteins, and capsid organization of the cyanophage Syn5: a "horned" bacteriophage of marine synechococcus. (2007) Pope WH, Weigele PR, Chang J, Pedulla ML, Ford ME, Houtz JM, Jiang W, Chiu W, Hatfull GF, Hendrix RW, King J, J Mol Biol
Organization of cytokeratin cytoskeleton and germ plasm in the vegetal cortex of Xenopus laevis oocytes depends on coding and non-coding RNAs: three-dimensional and ultrastructural analysis. (2007) Kloc M, Bilinski S, Dougherty MT, Exp Cell Res
Computing a family of skeletons of volumetric models for shape description. (2007) Ju T, Baker ML, Chiu W, Comput Aided Des
Learning-based segmentation framework for tissue images containing gene expression data. (2007) Bello M, Ju T, Carson J, Warren J, Chiu W, Kakadiaris IA, IEEE Trans Med Imaging
Essential function of the built-in lid in the allosteric regulation of eukaryotic and archaeal chaperonins. (2007) Reissmann S, Parnot C, Booth CR, Chiu W, Frydman J, Nat Struct Mol Biol
Visualizing the ATPase cycle in a protein disaggregating machine: structural basis for substrate binding by ClpB. (2007) Lee S, Choi JM, Tsai FT, Mol Cell
SPARX, a new environment for Cryo-EM image processing. (2007) Hohn M, Tang G, Goodyear G, Baldwin PR, Huang Z, Penczek PA, Yang C, Glaeser RM, Adams PD, Ludtke SJ, J Struct Biol
Identification of secondary structure elements in intermediate-resolution density maps. (2007) Baker ML, Ju T, Chiu W, Structure
EMAN2: an extensible image processing suite for electron microscopy. (2007) Tang G, Peng L, Baldwin PR, Mann DS, Jiang W, Rees I, Ludtke SJ, J Struct Biol
Electron cryotomography reveals the portal in the herpesvirus capsid. (2007) Chang JT, Schmid MF, Rixon FJ, Chiu W, J Virol
Ribosome binding of a single copy of the SecY complex: implications for protein translocation. (2007) Ménétret JF, Schaletzky J, Clemons WM Jr, Osborne AR, Skånland SS, Denison C, Gygi SP, Kirkpatrick DS, Park E, Ludtke SJ, Rapoport TA, Akey CW, Mol Cell
Modular software platform for low-dose electron microscopy and tomography. (2007) Marsh MP, Chang JT, Booth CR, Liang NL, Schmid MF, Chiu W, J Microsc
DNA packaging and delivery machines in tailed bacteriophages. (2007) Johnson JE, Chiu W, Curr Opin Struct Biol
Single-particle electron cryomicroscopy of the ion channels in the excitation-contraction coupling junction. (2007) Serysheva II, Chiu W, Ludtke SJ, Methods Cell Biol
Cryoelectron microscopy of icosahedral virus particles. (2007) Jiang W, Chiu W, Methods Mol Biol

2006

3D volume reconstruction of a mouse brain from histological sections using warp filtering. (2006) Ju T, Warren J, Carson J, Bello M, Kakadiaris I, Chiu W, Thaller C, Eichele G, J Neurosci Methods
Ab initio modeling of the herpesvirus VP26 core domain assessed by CryoEM density. (2006) Baker ML, Jiang W, Wedemeyer WJ, Rixon FJ, Baker D, Chiu W, PLoS Comput Biol
An expanded conformation of single-ring GroEL-GroES complex encapsulates an 86 kDa substrate. (2006) Chen DH, Song JL, Chuang DT, Chiu W, Ludtke SJ, Structure
Cryoelectron microscopy structures of rotavirus NSP2-NSP5 and NSP2-RNA complexes: implications for genome replication. (2006) Jiang X, Jayaram H, Kumar M, Ludtke SJ, Estes MK, Prasad BV, J Virol
Close membrane-membrane proximity induced by Ca(2+)-dependent multivalent binding of synaptotagmin-1 to phospholipids. (2006) Araç D, Chen X, Khant HA, Ubach J, Ludtke SJ, Kikkawa M, Johnson AE, Chiu W, Südhof TC, Rizo J, Nat Struct Mol Biol
Structural biology of cellular machines. (2006) Chiu W, Baker ML, Almo SC, Trends Cell Biol
Cryo-EM asymmetric reconstruction of bacteriophage P22 reveals organization of its DNA packaging and infecting machinery. (2006) Chang J, Weigele P, King J, Chiu W, Jiang W, Structure
Structure of epsilon15 bacteriophage reveals genome organization and DNA packaging/injection apparatus. (2006) Jiang W, Chang J, Jakana J, Weigele P, King J, Chiu W, Nature
High-resolution molecular and antigen structure of the VP8* core of a sialic acid-independent human rotavirus strain. (2006) Monnier N, Higo-Moriguchi K, Sun ZY, Prasad BV, Taniguchi K, Dormitzer PR, J Virol
Structure of Halothiobacillus neapolitanus carboxysomes by cryo-electron tomography. (2006) Schmid MF, Paredes AM, Khant HA, Soyer F, Aldrich HC, Chiu W, Shively JM, J Mol Biol
Cryoelectron microscopy of protein IX-modified adenoviruses suggests a new position for the C terminus of protein IX. (2006) Marsh MP, Campos SK, Baker ML, Chen CY, Chiu W, Barry MA, J Virol
Automated segmentation of molecular subunits in electron cryomicroscopy density maps. (2006) Baker ML, Yu Z, Chiu W, Bajaj C, J Struct Biol
Assessing the capabilities of a 4kx4k CCD camera for electron cryo-microscopy at 300kV. (2006) Booth CR, Jakana J, Chiu W, J Struct Biol
Outcome of a workshop on archiving structural models of biological macromolecules. (2006) Berman HM, Burley SK, Chiu W, Sali A, Adzhubei A, Bourne PE, Bryant SH, Dunbrack RL Jr, Fidelis K, Frank J, Godzik A, Henrick K, Joachimiak A, Heymann B, Jones D, Markley JL, Moult J, Montelione GT, Orengo C, Rossmann MG, Rost B, Saibil H, Schwede T, Standley DM, Westbrook JD, Structure
Refinement of protein structures by iterative comparative modeling and CryoEM density fitting. (2006) Topf M, Baker ML, Marti-Renom MA, Chiu W, Sali A, J Mol Biol

2005

A digital atlas to characterize the mouse brain transcriptome. (2005) Carson JP, Ju T, Lu HC, Thaller C, Xu M, Pallas SL, Crair MC, Warren J, Chiu W, Eichele G, PLoS Comput Biol
Electron cryomicroscopy of single particles at subnanometer resolution. (2005) Jiang W, Ludtke SJ, Curr Opin Struct Biol
Mutational analysis of the SARS virus Nsp15 endoribonuclease: identification of residues affecting hexamer formation. (2005) Guarino LA, Bhardwaj K, Dong W, Sun J, Holzenburg A, Kao C, J Mol Biol
ERj1p uses a universal ribosomal adaptor site to coordinate the 80S ribosome at the membrane. (2005) Blau M, Mullapudi S, Becker T, Dudek J, Zimmermann R, Penczek PA, Beckmann R, Nat Struct Mol Biol
A structure of the human apoptosome at 12.8 A resolution provides insights into this cell death platform. (2005) Yu X, Acehan D, Ménétret JF, Booth CR, Ludtke SJ, Riedl SJ, Shi Y, Wang X, Akey CW, Structure
Fast rotational matching of single-particle images. (2005) Cong Y, Jiang W, Birmanns S, Zhou ZH, Chiu W, Wriggers W, J Struct Biol
Electron cryomicroscopy of biological machines at subnanometer resolution. (2005) Chiu W, Baker ML, Jiang W, Dougherty M, Schmid MF, Structure
Structure of Ca2+ release channel at 14 A resolution. (2005) Serysheva II, Hamilton SL, Chiu W, Ludtke SJ, J Mol Biol
Structural characterization of components of protein assemblies by comparative modeling and electron cryo-microscopy. (2005) Topf M, Baker ML, John B, Chiu W, Sali A, J Struct Biol
Structural analysis of the anaphase-promoting complex reveals multiple active sites and insights into polyubiquitylation. (2005) Passmore LA, Booth CR, Vénien-Bryan C, Ludtke SJ, Fioretto C, Johnson LN, Chiu W, Barford D, Mol Cell
Common ancestry of herpesviruses and tailed DNA bacteriophages. (2005) Baker ML, Jiang W, Rixon FJ, Chiu W, J Virol
Superparamagnetic gadonanotubes are high-performance MRI contrast agents. (2005) Sitharaman B, Kissell KR, Hartman KB, Tran LA, Baikalov A, Rusakova I, Sun Y, Khant HA, Ludtke SJ, Chiu W, Laus S, Tóth E, Helm L, Merbach AE, Wilson LJ, Chem Commun (Camb)
The pore structure of the closed RyR1 channel. (2005) Ludtke SJ, Serysheva II, Hamilton SL, Chiu W, Structure
Architecture of the ribosome-channel complex derived from native membranes. (2005) Ménétret JF, Hegde RS, Heinrich SU, Chandramouli P, Ludtke SJ, Rapoport TA, Akey CW, J Mol Biol
Delivery of germinal granules and localized RNAs via the messenger transport organizer pathway to the vegetal cortex of Xenopus oocytes occurs through directional expansion of the mitochondrial cloud. (2005) Wilk K, Bilinski S, Dougherty MT, Kloc M, Int J Dev Biol
Structural biology of old world and new world alphaviruses. (2005) Paredes A, Weaver S, Watowich S, Chiu W, Arch Virol Suppl

2004

Structure of the acrosomal bundle. (2004) Schmid MF, Sherman MB, Matsudaira P, Chiu W, Nature
Mitochondrial ATP synthasome: three-dimensional structure by electron microscopy of the ATP synthase in complex formation with carriers for Pi and ADP/ATP. (2004) Chen C, Ko Y, Delannoy M, Ludtke SJ, Chiu W, Pedersen PL, J Biol Chem
Conformational changes in Sindbis virions resulting from exposure to low pH and interactions with cells suggest that cell penetration may occur at the cell surface in the absence of membrane fusion. (2004) Paredes AM, Ferreira D, Horton M, Saad A, Tsuruta H, Johnston R, Klimstra W, Ryman K, Hernandez R, Chiu W, Brown DT, Virology
Seeing GroEL at 6 A resolution by single particle electron cryomicroscopy. (2004) Ludtke SJ, Chen DH, Song JL, Chuang DT, Chiu W, Structure
Automatic particle selection: results of a comparative study. (2004) Zhu Y, Carragher B, Glaeser RM, Fellmann D, Bajaj C, Bern M, Mouche F, de Haas F, Hall RJ, Kriegman DJ, Ludtke SJ, Mallick SP, Penczek PA, Roseman AM, Sigworth FJ, Volkmann N, Potter CS, J Struct Biol
Formation, architecture and polarity of female germline cyst in Xenopus. (2004) Kloc M, Bilinski S, Dougherty MT, Brey EM, Etkin LD, Dev Biol
Experimental verification of conformational variation of human fatty acid synthase as predicted by normal mode analysis. (2004) Brink J, Ludtke SJ, Kong Y, Wakil SJ, Ma J, Chiu W, Structure
How a G protein binds a membrane. (2004) Zhang Z, Melia TJ, He F, Yuan C, McGough A, Schmid MF, Wensel TG, J Biol Chem
Structure of the bifunctional and Golgi-associated formiminotransferase cyclodeaminase octamer. (2004) Mao Y, Vyas NK, Vyas MN, Chen DH, Ludtke SJ, Chiu W, Quiocho FA, EMBO J
Structural rearrangements in the membrane penetration protein of a non-enveloped virus. (2004) Dormitzer PR, Nason EB, Prasad BV, Harrison SC, Nature
A 9 angstroms single particle reconstruction from CCD captured images on a 200 kV electron cryomicroscope. (2004) Booth CR, Jiang W, Baker ML, Zhou ZH, Ludtke SJ, Chiu W, J Struct Biol
Interactions between the inner and outer capsids of bluetongue virus. (2004) Nason EL, Rothagel R, Mukherjee SK, Kar AK, Forzan M, Prasad BV, Roy P, J Virol

2003

Cross-correlation and merging of crystallographic reflections derived from cryoelectron micrographs of 3D crystals: application to the Limulus acrosomal bundle. (2003) Schmid MF, J Struct Biol

2001

A 11.5 A single particle reconstruction of GroEL using EMAN. (2001) Ludtke SJ, Jakana J, Song JL, Chuang DT, Chiu W, J Mol Biol